BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023C02SP1|AL428020
(1005 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1616 0.0
3x_Contig1622 167 5e-41
3x_Contig1722 165 2e-40
3x_Contig1636 163 7e-40
3x_Contig1727 161 3e-39
>3x_Contig1486
Length = 12131
Score = 1616 bits (814), Expect = 0.0
Identities = 822/824 (99%), Gaps = 1/824 (0%)
Strand = Plus / Plus
Query: 1 gatcctattatctaacgttagatattccattgatactgtcgctgacaatcctatctgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11308 gatcctattatctaacgttagatattccattgatactgtcgctgacaatcctatctgttc 11367
Query: 61 gaacctggtaaggaaaaattgaaaaaggaaaaaacaaaaaataacgacaacagcaggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11368 gaacctggtaaggaaaaattgaaaaaggaaaaaacaaaaaataacgacaacagcaggact 11427
Query: 121 cgaacctgcgcgggcagagcc-aaaagatttctaatctttcgccttaaccgctcggccat 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 11428 cgaacctgcgcgggcagagcccaaaagatttctaatctttcgccttaaccgctcggccat 11487
Query: 180 gttgcctctttcttgaggaggcttgcagagaatgatagtatagtgttgtagaaattttga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11488 gttgcctctttcttgaggaggcttgcagagaatgatagtatagtgttgtagaaattttga 11547
Query: 240 gatgcctgtwaggttgtaccaattacttgtaaaatgtccaaatatcttattagcaatgct 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11548 gatgcctgtaaggttgtaccaattacttgtaaaatgtccaaatatcttattagcaatgct 11607
Query: 300 aatagaagataatataacgtagaagacatttatacaataccgtgaatcctggataatatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11608 aatagaagataatataacgtagaagacatttatacaataccgtgaatcctggataatatc 11667
Query: 360 ctttacttttgacaacaacagagaaatgatttcatattagtattctttttttactattaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11668 ctttacttttgacaacaacagagaaatgatttcatattagtattctttttttactattaa 11727
Query: 420 tcaatcctttaatctttcgtccattgatctgcactttcgatctcgaaagaatatttgaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11728 tcaatcctttaatctttcgtccattgatctgcactttcgatctcgaaagaatatttgaaa 11787
Query: 480 gccatgatagttaatccatgatacaaagataaaagtctagccattatagatacaaagtga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11788 gccatgatagttaatccatgatacaaagataaaagtctagccattatagatacaaagtga 11847
Query: 540 ggttcaatctcggaactatattgttaggtaatattatcaatctcacattcacagctcact 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11848 ggttcaatctcggaactatattgttaggtaatattatcaatctcacattcacagctcact 11907
Query: 600 tgttcctgcctctttggcgagcctcaatgcgtcttcaacttcttcatcatgatcaattac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11908 tgttcctgcctctttggcgagcctcaatgcgtcttcaacttcttcatcatgatcaattac 11967
Query: 660 gaaggccacaaatggtcttactttgggaatggattcgtactcatttgtatccacaaattt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11968 gaaggccacaaatggtcttactttgggaatggattcgtactcatttgtatccacaaattt 12027
Query: 720 cttaagaacagaccatgcagttgctcggaactttgcgttcacactttctacttgttcgtc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12028 cttaagaacagaccatgcagttgctcggaactttgcgttcacactttctacttgttcgtc 12087
Query: 780 tgaagctactcttgtaaaattgtcaaatgtttcactgtcaacta 823
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12088 tgaagctactcttgtaaaattgtcaaatgtttcactgtcaacta 12131
>3x_Contig1622
Length = 13445
Score = 167 bits (84), Expect = 5e-41
Identities = 91/92 (98%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 96 aaaaaataacgacaacagcaggactcgaacctgcgcgggcagagcc-aaaagatttctaa 154
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4337 aaaaaataacgacaacagcaggactcgaacctgcgcgggcagagcccaaaagatttctaa 4278
Query: 155 tctttcgccttaaccgctcggccatgttgcct 186
||||||||||||||||||||||||||||||||
Sbjct: 4277 tctttcgccttaaccgctcggccatgttgcct 4246
Score = 157 bits (79), Expect = 5e-38
Identities = 89/91 (97%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 96 aaaaaataacgacaacagcaggactcgaacctgcgcgggcagagcc-aaaagatttctaa 154
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4842 aaaaaatgacgacaacagcaggactcgaacctgcgcgggcagagcccaaaagatttctaa 4783
Query: 155 tctttcgccttaaccgctcggccatgttgcc 185
|||||||||||||||||||||||||||||||
Sbjct: 4782 tctttcgccttaaccgctcggccatgttgcc 4752
>3x_Contig1722
Length = 17718
Score = 165 bits (83), Expect = 2e-40
Identities = 90/91 (98%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 96 aaaaaataacgacaacagcaggactcgaacctgcgcgggcagag-ccaaaagatttctaa 154
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1631 aaaaaataacgacaacagcaggactcgaacctgcgcgggcagagcccaaaagatttctaa 1690
Query: 155 tctttcgccttaaccgctcggccatgttgcc 185
|||||||||||||||||||||||||||||||
Sbjct: 1691 tctttcgccttaaccgctcggccatgttgcc 1721
>3x_Contig1636
Length = 15667
Score = 163 bits (82), Expect = 7e-40
Identities = 89/90 (98%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 97 aaaaataacgacaacagcaggactcgaacctgcgcgggcagagcc-aaaagatttctaat 155
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6309 aaaaataacgacaacagcaggactcgaacctgcgcgggcagagcccaaaagatttctaat 6368
Query: 156 ctttcgccttaaccgctcggccatgttgcc 185
||||||||||||||||||||||||||||||
Sbjct: 6369 ctttcgccttaaccgctcggccatgttgcc 6398
>3x_Contig1727
Length = 17872
Score = 161 bits (81), Expect = 3e-39
Identities = 97/100 (97%), Gaps = 3/100 (3%)
Strand = Plus / Minus
Query: 90 aaaaacaaaaaa--taacgacaacagcaggactcgaacctgcgcgggcagagcc-aaaag 146
|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 13381 aaaaacaaaaaagataacgacaacagcaggactcgaacctgcgcgggcagagcccaaaag 13322
Query: 147 atttctaatctttcgccttaaccgctcggccatgttgcct 186
||||||||||||||||||||||||||||||||||||||||
Sbjct: 13321 atttctaatctttcgccttaaccgctcggccatgttgcct 13282
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8898
Number of Sequences: 1807
Number of extensions: 8898
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 5
length of query: 1005
length of database: 10,358,551
effective HSP length: 16
effective length of query: 989
effective length of database: 10,329,639
effective search space: 10216012971
effective search space used: 10216012971
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)